Sample ID: P-2025-04567
Nanopore (MinION) RUNNING
Reads: 3.2 M · Elapsed: 2h 45m
Illumina (NovaSeq) QUEUED
Estimated Start: 6h 30m
| blaNDM-1 Carbapenemase |
High |
| blaKPC-2 Carbapenemase |
High |
| blaOXA-48 Carbapenemase |
High |
| blaCTX-M-15 ESBL |
High |
| blaSHV-12 ESBL |
Medium |
| oqxB Fluoroquinolone |
Medium |
| qnrS1 Fluoroquinolone |
Medium |
| aac(6')-Ib-cr Aminoglycoside |
Medium |
| armA Aminoglycoside |
High |
| mcr-1 Colistin |
High |
| tetA Tetracycline |
Low |
| sul1 Sulfonamide |
Low |
| Gene ID | NARG_16872 |
| Similarity | 63% |
| Confidence | 92% |
| Class | Beta-lactamase-like |
| Location | Plasmid (IncX3) |
3 Other Novel Signals (Low priority)
| Read Quality | Good Q30: 92% |
| Run Quality | Good Yield: 3.2 Gb |
| Contamination | None detected |
| Library Prep | Pass |
| Barcode Balance | Good |
| Sample ID | Type | Status | REI Score | TAT |
|---|---|---|---|---|
| P-2025-04501 | Urine | Sequencing | 76 | 3h 1m |
| P-2025-04502 | Swab | Analyzing | 35 | 26h |
| P-2025-04503 | Catheter Tip | Completed | 23 | 12h 19m |
| P-2025-04504 | Urine | Sequencing | 30 | 4h 17m |
| P-2025-04505 | CSF | Sequencing | 80 | 23h 43m |
| P-2025-04506 | Swab | Sequencing | 41 | 16h 52m |
| P-2025-04507 | CSF | Queued | 85 | 5h 19m |
| P-2025-04508 | CSF | Completed | 53 | 27h |
| P-2025-04509 | Swab | Sequencing | 38 | 19h 57m |
| P-2025-04510 | Urine | Sequencing | 15 | 5h 17m |